4K12
Structural Basis for Host Specificity of Factor H Binding by Streptococcus pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-14 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.587, 48.985, 71.382 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.964 - 1.079 |
R-factor | 0.1552 |
Rwork | 0.154 |
R-free | 0.17030 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.243 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.120 |
High resolution limit [Å] | 1.079 | 2.330 | 1.079 |
Rmerge | 0.044 | 0.030 | 0.359 |
Number of reflections | 63150 | ||
<I/σ(I)> | 15.1 | ||
Completeness [%] | 99.6 | 96.8 | 99.7 |
Redundancy | 6.9 | 6.8 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 20% PEG3500, 0.1 M sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
2 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 20% PEG3500, 0.1 M sodium acetate, soaked in 0.5 M sodium iodide, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |