4HHF
Crystal Structure of chemically synthesized scorpion alpha-toxin OD1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-05-14 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 48.727, 48.727, 63.245 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.100 - 1.800 |
R-factor | 0.18593 |
Rwork | 0.185 |
R-free | 0.20192 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sn1 |
RMSD bond length | 0.027 |
RMSD bond angle | 2.671 |
Data reduction software | CrystalClear |
Data scaling software | CrystalClear |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.100 | 1.640 |
High resolution limit [Å] | 1.580 | 1.580 |
Rmerge | 0.039 | 0.325 |
Number of reflections | 8431 | |
<I/σ(I)> | 22.1 | 1.5 |
Completeness [%] | 97.2 | 95.6 |
Redundancy | 3.21 | 1.54 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 1 uL 20 mg/mL lyophilized toxin in 2 mM hydrochloric acid + 1 uL reservoir (0.1 M Tris-HCl, pH 7.5, 2% v/v dioxane, 56-60% v/v MPD) against 500 uL reservoir (rod-shaped crystals appeared after 24 hours, grew to 0.5 x 0.1 x 0.1 mm), VAPOR DIFFUSION, HANGING DROP, temperature 277K |