4GAF
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra, bound to human Interleukin-1 receptor type 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-14 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9755 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 60.350, 149.270, 126.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.860 - 2.150 |
R-factor | 0.2183 |
Rwork | 0.215 |
R-free | 0.27120 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.022 |
RMSD bond angle | 1.983 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.150 | 4.630 | 2.150 |
Rmerge | 0.061 | 0.035 | 0.560 |
Number of reflections | 31476 | ||
<I/σ(I)> | 12.8 | ||
Completeness [%] | 99.9 | 98.9 | 100 |
Redundancy | 5.6 | 5.4 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 20% PEG 3350, 100 mM Tris, 200 mM lithium citrate, VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 7.0 |