Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4EJF

Allosteric peptides that bind to a caspase zymogen and mediate caspase tetramerization

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]80
Detector technologyCCD
Collection date2009-08-05
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameC 1 2 1
Unit cell lengths128.299, 105.692, 91.924
Unit cell angles90.00, 106.61, 90.00
Refinement procedure
Resolution58.933 - 2.647
R-factor0.1907
Rwork0.188
R-free0.23910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3nr2
RMSD bond length0.003
RMSD bond angle0.726
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER
Refinement softwarePHENIX (dev_713)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]80.14880.1482.790
High resolution limit [Å]2.6408.3702.640
Rmerge0.0210.456
Total number of observations405218785
Number of reflections34281
<I/σ(I)>11.126.61.7
Completeness [%]99.799.399.8
Redundancy3.73.63.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.9292.1520% (w/v) PEG3350, 0.2 M NaThiocyanate pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 292.15K

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon