4DYO
Crystal Structure of Human Aspartyl Aminopeptidase (DNPEP) in complex with Aspartic acid Hydroxamate
Replaces: 3L6SExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9763 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 244.595, 244.595, 244.595 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.690 - 2.200 |
R-factor | 0.156 |
Rwork | 0.155 |
R-free | 0.19470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ijz |
RMSD bond length | 0.015 |
RMSD bond angle | 1.522 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0089) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.110 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.179 | 0.833 |
Number of reflections | 32185 | |
<I/σ(I)> | 10.4 | 2.2 |
Completeness [%] | 99.6 | 97.5 |
Redundancy | 10.8 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293.15 | 15% PEG3350, 0.25 M magnesium chloride, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293.15K |