4DFK
large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with 5-(N-(10-hydroxydecanoyl)-aminopentinyl)-2-dUTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-06-09 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999900 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 108.211, 108.211, 90.115 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.857 - 1.647 |
R-factor | 0.1715 |
Rwork | 0.170 |
R-free | 0.19460 |
Structure solution method | Difference Fourier Techniques |
Starting model (for MR) | 3m8s |
RMSD bond length | 0.009 |
RMSD bond angle | 1.135 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.7.3_928) |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.857 | 1.750 |
High resolution limit [Å] | 1.647 | 1.650 |
Number of reflections | 73659 | |
<I/σ(I)> | 16.14 | 1.65 |
Completeness [%] | 99.8 | 98.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 18% PEG 8000, 200mM Mg-Formate, 100 mMTris pH 8.0 , VAPOR DIFFUSION, HANGING DROP, temperature 291K |