4YYL
Phenolic acid derivative bound to influenza strain H1N1 polymerase subunit PA endonuclease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-27 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 66.766, 66.766, 126.251 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.274 - 1.905 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.23370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m5q |
RMSD bond length | 0.017 |
RMSD bond angle | 1.612 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP (11.0.05) |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.168 | 0.188 | |
Rmeas | 0.173 | 0.198 | |
Rpim | 0.052 | 0.059 | 0.656 |
Total number of observations | 310070 | ||
Number of reflections | 22713 | ||
<I/σ(I)> | 7.7 | ||
Completeness [%] | 98.1 | 85.4 | 100 |
Redundancy | 13.7 | 11.2 | 12.7 |
CC(1/2) | 0.957 | 0.572 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 291 | 100 mM MES, 1.1 M ammonium sulfate, 0.1 M potassium chloride, 9 % trehalose |