4U0M
Structure of the Vibrio cholerae di-nucleotide cyclase (DncV) mutant D193N in complex with ATP, GTP and 5MTHFGLU2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.968 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.898, 59.860, 104.185 |
Unit cell angles | 90.00, 95.55, 90.00 |
Refinement procedure
Resolution | 42.568 - 2.300 |
R-factor | 0.2015 |
Rwork | 0.199 |
R-free | 0.25300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u0l |
RMSD bond length | 0.012 |
RMSD bond angle | 0.704 |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 103.700 |
High resolution limit [Å] | 2.300 |
Number of reflections | 38293 |
<I/σ(I)> | 12.9 |
Completeness [%] | 99.5 |
Redundancy | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 20% w/v PEG 3350, 200mM NaCl, 100mM Tris-HCl, 5mM GTP, 5mM ATP |