4PV0
Crystal structure of spleen tyrosine kinase (Syk) in complex with an imidazopyrazine inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.788, 84.972, 90.308 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.486 - 2.000 |
R-factor | 0.2306 |
Rwork | 0.228 |
R-free | 0.28200 |
Structure solution method | OTHER |
Starting model (for MR) | 1xba |
RMSD bond length | 0.012 |
RMSD bond angle | 1.265 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.7_650) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.490 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.054 | 0.581 |
Number of reflections | 20675 | |
Completeness [%] | 96.7 | 97.8 |
Redundancy | 4.8 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | VAPOR DIFFUSION, HANGING DROP |