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4LZ8

Crystal structures of GLuR2 ligand-binding-domain in complex with glutamate and positive allosteric modulators

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E DW
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS HTC
Wavelength(s)1.54
Spacegroup nameP 21 21 2
Unit cell lengths113.676, 164.953, 47.498
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution93.659 - 1.850
R-factor0.1982
Rwork0.196
R-free0.23160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1lbc
RMSD bond length0.023
RMSD bond angle1.861
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]93.65950.0001.920
High resolution limit [Å]1.8503.9901.850
Rmerge0.0600.030
Number of reflections74948
<I/σ(I)>15.3
Completeness [%]96.999.794.3
Redundancy6.46.85.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2771 uL 7 mg/mL protein in 10 mM (S)-Glu, 10 mM HEPES, pH 7.5, 20 mM sodium chloride, 1 mM EDTA, 150 uM ligand (from 30 mM DMSO stock) + 1 uL reservoir (10% PEG8000, 0.1 M zinc acetate, 0.1 M sodium acetate, pH 5.5), crystals appeared in 3-5 days, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-05-15

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