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4II3

Crystal structure of S. pombe Ubiquitin activating enzyme 1 (Uba1) in complex with ubiquitin and ATP/Mg

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]108
Detector technologyCCD
Collection date2012-04-16
DetectorADSC QUANTUM 315
Wavelength(s)0.979
Spacegroup nameP 21 21 2
Unit cell lengths180.500, 113.300, 126.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.900
R-factor0.2392
Rwork0.239
R-free0.28290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3cmm
RMSD bond length0.005
RMSD bond angle0.966
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareCNS
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.000
High resolution limit [Å]2.9006.2402.900
Rmerge0.1130.0500.397
Number of reflections55035
<I/σ(I)>8.1
Completeness [%]95.298.689.4
Redundancy3.44.32.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52910.1M Sodium Cacodylate, 0.2M Calcium Acetate, 11.5% Peg8000, 3% 1,5 diaminopentane, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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