4DEP
Structure of the IL-1b signaling complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-08 |
Detector | ADSC Q315R |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 105.990, 65.900, 163.400 |
Unit cell angles | 90.00, 90.35, 90.00 |
Refinement procedure
Resolution | 19.700 - 3.100 |
R-factor | 0.213 |
Rwork | 0.210 |
R-free | 0.27700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 1.523 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.2_869)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.700 | 3.200 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.068 | 0.361 |
Number of reflections | 41079 | |
<I/σ(I)> | 10.5 | 2.2 |
Completeness [%] | 96.3 | 98.7 |
Redundancy | 1.7 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.5 | 293 | 12% PEG 5000 MME, 100 mM MES pH 6.5, 12% 1-propanol, protein at 12 mg/mL, VAPOR DIFFUSION, HANGING DROP, temperature 293K |