4CC9
Crystal structure of human SAMHD1 (amino acid residues 582-626) bound to Vpx isolated from sooty mangabey and human DCAF1 (amino acid residues 1058-1396)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-28 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.250, 82.881, 115.561 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.227 - 2.473 |
R-factor | 0.1778 |
Rwork | 0.176 |
R-free | 0.21640 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.168 |
Data reduction software | XDS |
Phasing software | autoSHARP |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.610 |
High resolution limit [Å] | 2.460 | 2.560 |
Rmerge | 0.090 | 0.530 |
Number of reflections | 25520 | |
<I/σ(I)> | 15.9 | 3.6 |
Completeness [%] | 99.3 | 97.8 |
Redundancy | 6.5 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.2 M MAGNESIUM CHLORIDE, 0.1 M HEPES PH 7.5, 15% PEG 400 |