Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ZY7

Crystal structure of computationally redesigned gamma-adaptin appendage domain forming a symmetric homodimer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2011-04-26
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths50.636, 44.248, 53.017
Unit cell angles90.00, 91.91, 90.00
Refinement procedure
Resolution23.135 - 1.090
R-factor0.1592
Rwork0.158
R-free0.18060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2a7b
RMSD bond length0.011
RMSD bond angle1.399
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]23.1401.100
High resolution limit [Å]1.0901.090
Rmerge0.0500.330
Number of reflections90534
<I/σ(I)>33.11.9
Completeness [%]92.644.6
Redundancy3.61.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
15PROTEIN SOLUTION: 20MM MES PH 6M 150MM NACL WELL SOLUTION: 0.1M NA ACETATE PH 5, 20% (W/V) PEG 8K, 6% (V/V) 2-PROPANOL CRYOPROTECTANT: WELL SOLUTION PLUS 15% (V/V) ETHYLENE GLYCOL

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon