3VA2
Crystal structure of human Interleukin-5 in complex with its alpha receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.633, 88.680, 126.674 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.027 - 2.703 |
R-factor | 0.2253 |
Rwork | 0.223 |
R-free | 0.27550 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.730 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
High resolution limit [Å] | 2.703 | 6.030 | 2.800 |
Rmerge | 14.303 | 0.349 | |
Number of reflections | 18667 | ||
<I/σ(I)> | 22.3 | 59.1 | 7.2 |
Completeness [%] | 99.4 | 94.9 | 100 |
Redundancy | 6.6 | 5.8 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 293 | 0.1M Na HEPES, 22% (v/v) PEG 4000, 2% i-Propanol, 6% (w/v) 1,6-Hexanediol , pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K |