3UWQ
1.80 Angstrom resolution crystal structure of orotidine 5'-phosphate decarboxylase from Vibrio cholerae O1 biovar eltor str. N16961 in complex with uridine-5'-monophosphate (UMP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-10-24 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.140, 96.944, 104.082 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.330 - 1.800 |
R-factor | 0.15158 |
Rwork | 0.150 |
R-free | 0.17787 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ldv |
RMSD bond length | 0.007 |
RMSD bond angle | 1.631 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.063 | 0.527 |
Number of reflections | 49918 | |
<I/σ(I)> | 29.48 | 4.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.4 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | protein at 7 mg/mL in 10 mM Tris-HCl, 500 mM NaCl, 5 mM BME. Crystallization condition: the PACT Suite (A4: 0.1 M SPG buffer pH 7.0 25 % (w/v) PEG1500), VAPOR DIFFUSION, SITTING DROP, temperature 295K |