3UC0
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-09-19 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8726 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.937, 113.864, 169.583 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.175 - 2.710 |
R-factor | 0.2219 |
Rwork | 0.220 |
R-free | 0.25240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uaj |
RMSD bond length | 0.007 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.9) |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (BUSTER 2.9.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.175 | 46.175 | 2.860 |
High resolution limit [Å] | 2.710 | 8.570 | 2.710 |
Rmerge | 0.034 | 0.429 | |
Total number of observations | 5869 | 11882 | |
Number of reflections | 41316 | ||
<I/σ(I)> | 11.3 | 15.8 | 1.8 |
Completeness [%] | 97.7 | 97.9 | 86.4 |
Redundancy | 4.1 | 4.1 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 2 M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 292K |