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3SI8

Human DNA polymerase eta - DNA ternary complex with the 5'T of a CPD in the active site (TT2)

Replaces:  3MR4
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths61.236, 80.259, 139.759
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.280 - 2.150
R-factor0.241
Rwork0.241
R-free0.25800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3mr2
RMSD bond length0.007
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.250
High resolution limit [Å]2.1502.150
Rmerge0.0860.593
Number of reflections37705
<I/σ(I)>12.43
Completeness [%]98.797.1
Redundancy8.46.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62950.1 M MES, 5 mM MgCl2, 19-21% (w/v) PEG 2K-MME, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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PDB entries from 2024-05-29

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