3S2K
Structural basis of Wnt signaling inhibition by Dickkopf binding to LRP5/6.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-13 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.0039 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 96.043, 108.014, 173.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.820 - 2.800 |
R-factor | 0.1967 |
Rwork | 0.194 |
R-free | 0.25060 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.693 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.850 |
High resolution limit [Å] | 2.750 | 5.920 | 2.750 |
Rmerge | 0.071 | 0.026 | 0.627 |
Number of reflections | 47525 | ||
<I/σ(I)> | 9.9 | ||
Completeness [%] | 99.7 | 97.7 | 99.8 |
Redundancy | 3.4 | 3.3 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | 10-15% PEG3350, 100 mM Tris-Cl (pH 8.5), 100 mM Lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 295K |