3OXG
human lysine methyltransferase Smyd3 in complex with AdoHcy (Form III)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-23 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.97908 |
Spacegroup name | P 61 |
Unit cell lengths | 103.439, 103.439, 112.202 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 3.410 |
R-factor | 0.2253 |
Rwork | 0.224 |
R-free | 0.24930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oxf |
RMSD bond length | 0.008 |
RMSD bond angle | 1.095 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.520 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.130 | 0.649 |
Number of reflections | 9395 | |
<I/σ(I)> | 2.5 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.4 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 277 | 20% polyethylene glycol monomethyl ether 550, 0.1M NaCl, 0.1M bicine, pH 9.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |