Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3OPZ

Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]108
Detector technologyIMAGE PLATE
Collection date2009-04-27
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 31
Unit cell lengths178.140, 178.140, 140.710
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.790 - 3.400
R-factor0.1647
Rwork0.164
R-free0.20530
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.527
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.9)
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]154.27329.7903.580
High resolution limit [Å]3.40010.7503.400
Rmerge0.0470.516
Total number of observations751335581
Number of reflections68611
<I/σ(I)>6.713.11.5
Completeness [%]99.895.2100
Redundancy3.63.63.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.1 M Bicina, 10 % PEG 20000, 4% 1,4-dioxano, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon