3L6B
X-ray crystal structure of human serine racemase in complex with malonate a potent inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-29 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97960 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 54.570, 84.290, 69.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.110 - 1.500 |
R-factor | 0.161 |
Rwork | 0.160 |
R-free | 0.17700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | HUMAN SERINE RACEMASE SOLVED BY SELENOMETHIONINE SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.169 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.320 | 1.580 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.049 | 0.275 |
Number of reflections | 52035 | |
<I/σ(I)> | 13.9 | 4.4 |
Completeness [%] | 99.0 | 100 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295 | pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 295K |