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3L6B

X-ray crystal structure of human serine racemase in complex with malonate a potent inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2008-10-29
DetectorADSC QUANTUM 315
Wavelength(s)0.97960
Spacegroup nameP 21 21 2
Unit cell lengths54.570, 84.290, 69.980
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.110 - 1.500
R-factor0.161
Rwork0.160
R-free0.17700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)HUMAN SERINE RACEMASE SOLVED BY SELENOMETHIONINE SAD
RMSD bond length0.008
RMSD bond angle1.169
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.3201.580
High resolution limit [Å]1.5001.500
Rmerge0.0490.275
Number of reflections52035
<I/σ(I)>13.94.4
Completeness [%]99.0100
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8295pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 295K

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