3KMZ
Crystal structure of RARalpha ligand binding domain in complex with the inverse agonist BMS493 and a corepressor fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2008-10-04 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.933 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 104.831, 105.625, 53.382 |
Unit cell angles | 90.00, 89.92, 90.00 |
Refinement procedure
Resolution | 43.400 - 2.100 |
R-factor | 0.17497 |
Rwork | 0.172 |
R-free | 0.22973 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dkf |
RMSD bond length | 0.010 |
RMSD bond angle | 1.216 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.4.0062) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.400 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.064 | 0.341 |
Number of reflections | 32768 | |
<I/σ(I)> | 13.2 | 3 |
Redundancy | 2.8 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 18% PEG 3350 (w/v), 0.15M NH4Cl, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |