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3KFL

Leishmania major methionyl-tRNA synthetase in complex with methionyladenylate and pyrophosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2009-04-23
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.97923
Spacegroup nameP 21 21 21
Unit cell lengths68.816, 88.802, 101.779
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.160 - 2.000
R-factor0.17033
Rwork0.168
R-free0.20871
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2csx
RMSD bond length0.010
RMSD bond angle1.197
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareBALBES
Refinement softwareREFMAC (refmac_5.5.0096)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0790.699
Number of reflections42546
<I/σ(I)>8.61.8
Completeness [%]100.0100
Redundancy5.35.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72982 microliters 24.44 mg/ml protein soln. [in 25 mM HEPES (pH 7.0), 500 mM NaCl, 0.025% Na-azide, 5% glycerol, 0.01 mM ZnCl2, 10 mM L-Met, 10 mM ATP] + 2 microliters well soln. [0.2 M K-formate, 26% PEG 3350 and additives of 10 mM L-Met and 1 mM TCEP]; crystal cryoprotected by quick soak in mother liquor supplemented with 15% ethylene glycol, vapor diffusion, hanging drop, temperature 298K

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