3HJX
Human prion protein variant D178N with V129
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Collection date | 2006-08-07 |
Wavelength(s) | 0.9198 |
Spacegroup name | I 21 21 21 |
Unit cell lengths | 39.159, 57.656, 93.315 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.380 - 2.000 |
R-factor | 0.208 |
Rwork | 0.205 |
R-free | 0.26630 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.464 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | EPMR |
Refinement software | REFMAC (5.5.0066) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.067 | 0.029 | 0.471 |
Number of reflections | 7405 | ||
<I/σ(I)> | 23.186 | ||
Completeness [%] | 99.5 | 97.3 | 99.9 |
Redundancy | 5 | 4.9 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1M Tris (pH 7.0), 2.0 M NaCl and 5 mM CdCl2, VAPOR DIFFUSION, SITTING DROP, temperature 293K |