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3GD2

isoxazole ligand bound to farnesoid X receptor (FXR)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 210
Wavelength(s)1.0
Spacegroup nameF 2 3
Unit cell lengths158.749, 158.749, 158.749
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.890 - 3.200
R-factor0.242
Rwork0.238
R-free0.29700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.023
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.310
High resolution limit [Å]3.2006.8903.200
Rmerge0.0780.0430.401
Number of reflections5601
<I/σ(I)>38.41
Completeness [%]100.0100100
Redundancy11.210.411.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52950.2M LiSO4, 25% PEG 3350, Hepes pH7.5, temperature 298K, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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PDB entries from 2024-07-10

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