3B13
Crystal structure of the DHR-2 domain of DOCK2 in complex with Rac1 (T17N mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-10 |
Wavelength(s) | 1 |
Spacegroup name | P 65 |
Unit cell lengths | 168.651, 168.651, 129.718 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.685 - 3.006 |
R-factor | 0.1853 |
Rwork | 0.183 |
R-free | 0.23350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wm9 2nz8 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.239 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.1_743)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 41625 | |
<I/σ(I)> | 9.08 | 1.94 |
Completeness [%] | 99.7 | 100 |
Redundancy | 3.21 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 100mM sodium citrate, 15% PEG 6000, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |