3A4P
human c-MET kinase domain complexed with 6-benzyloxyquinoline inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2007-03-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 157.227, 42.733, 46.039 |
Unit cell angles | 90.00, 102.91, 90.00 |
Refinement procedure
Resolution | 44.860 - 2.540 |
Rwork | 0.183 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID 1R1W |
RMSD bond length | 0.019 |
RMSD bond angle | 1.813 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 76.696 | 76.700 | 2.610 |
High resolution limit [Å] | 2.480 | 11.360 | 2.540 |
Rmerge | 0.146 | 0.062 | 0.650 |
Total number of observations | 401 | 2597 | |
Number of reflections | 10051 | ||
<I/σ(I)> | 9.4 | 1.2 | |
Completeness [%] | 99.9 | 99.8 | 100 |
Redundancy | 3.5 | 3.1 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 285 | 14%(w/v) PEG MME 5000, 5%(v/v) isopropanol, 12%(v/v) MPD, 0.1M Tris-Cl, 15%(v/v) Glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 285K |