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3EKV

Crystal structure of the wild type HIV-1 protease with the inhibitor, Amprenavir

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]200
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths50.723, 57.401, 61.741
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.190 - 1.750
R-factor0.19
Rwork0.190
R-free0.22610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1f7a
RMSD bond length0.007
RMSD bond angle1.414
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.750
Rmerge0.029
Number of reflections14987
<I/σ(I)>19
Completeness [%]79.7
Redundancy3.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.2300126mM Sodium Phosphate pH 6.2; 63mM sodium citrate; 24-29% ammonium sulphate, VAPOR DIFFUSION, HANGING DROP, temperature 300K

246031

PDB entries from 2025-12-10

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