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32JC

Structure of the pathogenic variant T186R of Human SHMT2 in a distorted tetrameric conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0000
Spacegroup nameP 65 2 2
Unit cell lengths160.410, 160.410, 206.040
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution80.330 - 3.070
R-factor0.3526
Rwork0.351
R-free0.38875
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.001
RMSD bond angle0.585
Data reduction softwareXDS
Data scaling softwareSTARANISO (2.2.19)
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0415)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.4003.350
High resolution limit [Å]3.0703.070
Rmeas2.582
Number of reflections233481165
<I/σ(I)>151.6
Completeness [%]94.9
Redundancy37.8
CC(1/2)0.9980.783
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP294MORPHEUS screen (Molecular Dimensions), condition E1

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