2VQM
Structure of HDAC4 catalytic domain bound to a hydroxamic acid inhbitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-02-20 |
Detector | ADSC CCD |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 108.866, 138.208, 69.603 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.221 |
Rwork | 0.219 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vqj |
RMSD bond length | 0.010 |
RMSD bond angle | 1.389 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.000 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.070 | 0.580 |
Number of reflections | 48786 | |
<I/σ(I)> | 16.9 | 2.7 |
Completeness [%] | 99.7 | 99.7 |
Redundancy | 7 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.4 | 1.5M AMMONIUM SULPHATE 0.1M MES PH 6.4 10% DIOXANE 1MM DTT |