Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VPP

Drosophila melanogaster deoxyribonucleoside kinase successfully activates gemcitabine in transduced cancer cell lines

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
Collection date2006-10-08
DetectorADSC CCD
Spacegroup nameP 21 21 2
Unit cell lengths120.106, 62.298, 68.078
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.200
R-factor0.209
Rwork0.207
R-free0.25300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1j90
RMSD bond length0.011
RMSD bond angle1.377
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]2.2602.260
High resolution limit [Å]2.2002.200
Rmerge0.0700.340
Number of reflections24968
<I/σ(I)>123.8
Completeness [%]99.199.9
Redundancy3.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.5pH 6.5

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon