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2VA5

X-ray crystal structure of beta secretase complexed with compound 8c

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX14.1
Synchrotron siteSRS
BeamlinePX14.1
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 61 2 2
Unit cell lengths102.138, 102.138, 168.258
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution51.070 - 2.750
R-factor0.232
Rwork0.228
R-free0.31900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1w50
RMSD bond length0.012
RMSD bond angle1.391
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareCSearch
Refinement softwareREFMAC (5.2.0019G)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.820
High resolution limit [Å]2.7502.750
Rmerge0.1200.460
Number of reflections13125
Completeness [%]98.899.9
Redundancy2.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
120-22.5% (W/V) PEG 5000 MONOMETHYLETHYL (MME), 200 MM SODIUM CITRATE (PH 6.6) AND 200 MM AMMONIUM IODIDE

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PDB entries from 2025-06-18

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