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2VA5

X-ray crystal structure of beta secretase complexed with compound 8c

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
BETA-SECRETASE 1 .polymer45550194.61UniProt (P56817)
Pfam (PF00026)
HOMO SAPIENS (HUMAN)BETA-SITE APP CLEAVING ENZYME 1, BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME 1, MEMBRANE-ASSOCIATED ASPARTIC PROTEASE 2, MEMAPSIN-2, ASPARTYL PROTEASE 2, ASP 2, ASP2
2B, C
(A)
IODIDE IONnon-polymer126.92Chemie (IOD)
3D
(A)
2-amino-6-[2-(1H-indol-6-yl)ethyl]pyrimidin-4(3H)-onenon-polymer254.31Chemie (C8C)
4E
(A)
waterwater18.068Chemie (HOH)
Sequence modifications
A: -62 - -48 (PDB: 2VA5)
A: -47 - 392 (UniProt: P56817)
PDBExternal DatabaseDetails
Lys -5Arg 56engineered mutation
Lys -4Arg 57engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight50194.6
Non-Polymers*Number of molecules3
Total formula weight508.1
All*Total formula weight50702.7
*Water molecules are not included.

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PDB entries from 2024-10-30

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