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2JEV

Crystal structure of human spermine,spermidine acetyltransferase in complex with a bisubstrate analog (N1-acetylspermine-S-CoA).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]194
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Spacegroup nameP 43
Unit cell lengths46.729, 46.729, 191.792
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.950 - 2.300
R-factor0.227
Rwork0.224
R-free0.27500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2f5i
RMSD bond length0.011
RMSD bond angle1.354
Data reduction softwareMOSFLM
Data scaling softwareCCP4
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.5002.420
High resolution limit [Å]2.3002.300
Rmerge0.0400.230
Number of reflections17959
<I/σ(I)>20.24.3
Completeness [%]98.593.9
Redundancy3.83.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5PROTEIN AT 15MG/ML IN 20 MM TRIS PH 8.0 CONTAINING 1 MM DTT, 0.1 MM EDTA, 4MM N1-ACETYLSPERMINE-S-COA. CRYSTALLIZED BY HANGING DROP VAPOUR DIFFUSION WITH 3-4 M NACL, 200 MM K/NA TARTRATE, 100 MM TRIS-HCL PH 7-8, 50 MM MGCL2

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PDB entries from 2025-06-18

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