2IVV
Crystal structure of phosphorylated RET tyrosine kinase domain complexed with the inhibitor PP1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-05-15 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 71.641, 70.955, 78.685 |
Unit cell angles | 90.00, 101.79, 90.00 |
Refinement procedure
Resolution | 25.670 - 2.250 |
R-factor | 0.187 |
Rwork | 0.185 |
R-free | 0.23700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | IN-HOUSE PART-REFINED STRUCTURE OF RET KINASE DOMAIN |
RMSD bond length | 0.017 |
RMSD bond angle | 1.535 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.100 | 2.370 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.060 | 0.200 |
Number of reflections | 18394 | |
<I/σ(I)> | 10.6 | 3.9 |
Completeness [%] | 99.8 | 99.8 |
Redundancy | 3.9 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | PROTEIN 1.5 MG/ML IN 20 MM TRIS-HCL PH 8.0, 100MM NACL, 1MM DTT, 1MM EDTA, 1MM SODIUM VANADATE RESERVOIR 2.8 M SODIUM FORMATE, 0.1 M SODIUM CITRATE PH 4.5, 0.2M LITHIUM CHLORIDE VAPOUR DIFFUSION, SITTING DROP, 289 K |