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2HVY

Crystal structure of an H/ACA box RNP from Pyrococcus furiosus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
Collection date2006-07-05
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths83.031, 90.950, 114.064
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.300
R-factor0.23984
Rwork0.238
R-free0.27807
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ey4
RMSD bond length0.006
RMSD bond angle1.045
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.340
High resolution limit [Å]2.3002.300
Rmerge0.0550.331
Number of reflections39234
<I/σ(I)>386.7
Completeness [%]99.7100
Redundancy6.87.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP530330% MPD, 35mM CH3COOMg, 10mM ATP, 50mM cacodylate , pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 303K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111MPD
1012H2O
211CH3COOMg
311ATP
411cacodylate
511H2O
612MPD
712CH3COOMg
812ATP
912cacodylate

217705

PDB entries from 2024-03-27

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