2E0A
Crystal structure of human pyruvate dehydrogenase kinase 4 in complex with AMPPNP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32B2 |
| Synchrotron site | SPring-8 |
| Beamline | BL32B2 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2006-05-17 |
| Detector | RIGAKU |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 71.121, 68.456, 79.755 |
| Unit cell angles | 90.00, 101.05, 90.00 |
Refinement procedure
| Resolution | 26.670 - 1.860 |
| R-factor | 0.196 |
| Rwork | 0.196 |
| R-free | 0.23100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1jm6 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.400 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.920 |
| High resolution limit [Å] | 1.850 | 1.850 |
| Number of reflections | 63193 | |
| <I/σ(I)> | 32.2146 | 3.07972 |
| Completeness [%] | 99.6 | 99.8 |
| Redundancy | 3.24669 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.1 | 300 | 1.7M ammonium sulfate, 2% PEG 400, 0.1M sodium HEPES, pH 7.1, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
