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2BD1

A possible role of the second calcium ion in interfacial binding: Atomic and medium resolution crystal structures of the quadruple mutant of phospholipase A2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsMACSCIENCE
Temperature [K]293
Detector technologyIMAGE PLATE
DetectorRIGAKU
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths74.580, 48.690, 67.550
Unit cell angles90.00, 102.30, 90.00
Refinement procedure
Resolution14.690 - 1.900
Rwork0.207
R-free0.24000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1une 1mkt
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]14.6901.990
High resolution limit [Å]1.9001.900
Rmerge0.0930.458
Number of reflections13356
Completeness [%]94.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.2293The crystallization droplet contained 5 micro litre of protein (18 to 20 mg/ml) in 50 mM tris buffer with 2 micro litre of MPD (60%) and the reservoir contained 70% of MPD., pH 7.2, VAPOR DIFFUSION, temperature 293K

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PDB entries from 2025-06-18

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