Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YAK

Complex of Bacillus subtilis TenA with 4-amino-2-methyl-5-hydroxymethylpyrimidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Detector technologyCCD
Collection date2004-08-08
DetectorADSC QUANTUM 210
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths82.958, 82.928, 296.364
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.390 - 2.500
R-factor0.217
Rwork0.217
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yaf
RMSD bond length0.008
RMSD bond angle1.200
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.660
High resolution limit [Å]2.5002.500
Number of reflections33417
<I/σ(I)>21.33.2
Completeness [%]93.368.6
Redundancy3.92.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.42970.7 M 1,6-hexanediol, 10 mM MgCl2, pH 4.4, VAPOR DIFFUSION, HANGING DROP, temperature 297K

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon