1YAK

Complex of Bacillus subtilis TenA with 4-amino-2-methyl-5-hydroxymethylpyrimidine

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005829	cellular_component	cytosol
A	0006725	biological_process	obsolete cellular aromatic compound metabolic process
A	0006772	biological_process	thiamine metabolic process
A	0006790	biological_process	sulfur compound metabolic process
A	0009228	biological_process	thiamine biosynthetic process
A	0009229	biological_process	thiamine diphosphate biosynthetic process
A	0016787	molecular_function	hydrolase activity
A	0044281	biological_process	small molecule metabolic process
A	0046483	biological_process	obsolete heterocycle metabolic process
A	0050334	molecular_function	thiaminase activity
A	1901360	biological_process	organic cyclic compound metabolic process
B	0005829	cellular_component	cytosol
B	0006725	biological_process	obsolete cellular aromatic compound metabolic process
B	0006772	biological_process	thiamine metabolic process
B	0006790	biological_process	sulfur compound metabolic process
B	0009228	biological_process	thiamine biosynthetic process
B	0009229	biological_process	thiamine diphosphate biosynthetic process
B	0016787	molecular_function	hydrolase activity
B	0044281	biological_process	small molecule metabolic process
B	0046483	biological_process	obsolete heterocycle metabolic process
B	0050334	molecular_function	thiaminase activity
B	1901360	biological_process	organic cyclic compound metabolic process
C	0005829	cellular_component	cytosol
C	0006725	biological_process	obsolete cellular aromatic compound metabolic process
C	0006772	biological_process	thiamine metabolic process
C	0006790	biological_process	sulfur compound metabolic process
C	0009228	biological_process	thiamine biosynthetic process
C	0009229	biological_process	thiamine diphosphate biosynthetic process
C	0016787	molecular_function	hydrolase activity
C	0044281	biological_process	small molecule metabolic process
C	0046483	biological_process	obsolete heterocycle metabolic process
C	0050334	molecular_function	thiaminase activity
C	1901360	biological_process	organic cyclic compound metabolic process
D	0005829	cellular_component	cytosol
D	0006725	biological_process	obsolete cellular aromatic compound metabolic process
D	0006772	biological_process	thiamine metabolic process
D	0006790	biological_process	sulfur compound metabolic process
D	0009228	biological_process	thiamine biosynthetic process
D	0009229	biological_process	thiamine diphosphate biosynthetic process
D	0016787	molecular_function	hydrolase activity
D	0044281	biological_process	small molecule metabolic process
D	0046483	biological_process	obsolete heterocycle metabolic process
D	0050334	molecular_function	thiaminase activity
D	1901360	biological_process	organic cyclic compound metabolic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE HMH A 301

Chain	Residue
A	ASP44
A	TYR47
A	LEU48
A	CYS135
A	TYR139
A	TYR163
A	GLU205

---

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE HMH D 302

Chain	Residue
D	LEU48
D	CYS135
D	TYR139
D	TYR163
D	GLU205
D	ASP44
D	TYR47

---

site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE HMH B 303

Chain	Residue
B	ASP44
B	TYR47
B	CYS135
B	TYR139
B	TYR163
B	GLU205

---

site_id	AC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE HMH C 304

Chain	Residue
C	ASP44
C	TYR47
C	CYS135
C	TYR139
C	TYR163
C	GLU205
C	HOH2069

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	ACT_SITE: Nucleophile => ECO:0000303|PubMed:18054064

Chain	Residue	Details
A	CYS135
B	CYS135
C	CYS135
D	CYS135

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	ACT_SITE: Proton donor => ECO:0000303|PubMed:18054064

Chain	Residue	Details
A	GLU205
B	GLU205
C	GLU205
D	GLU205

---

site_id	SWS_FT_FI3
Number of Residues	12
Details	BINDING: BINDING => ECO:0000269|PubMed:15709744, ECO:0000269|Ref.5

Chain	Residue	Details
A	ASP44
D	ASP44
D	TYR139
D	TYR163
A	TYR139
A	TYR163
B	ASP44
B	TYR139
B	TYR163
C	ASP44
C	TYR139
C	TYR163

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	SITE: Increases nucleophilicity of active site Cys => ECO:0000303|PubMed:18054064

Chain	Residue	Details
A	TYR47
B	TYR47
C	TYR47
D	TYR47

---