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1S1R

Crystal structures of prostaglandin D2 11-ketoreductase (AKR1C3) in complex with the non-steroidal anti-inflammatory drugs flufenamic acid and indomethacin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
Collection date2001-09-30
DetectorADSC QUANTUM 210
Wavelength(s)0.93
Spacegroup nameP 32 2 1
Unit cell lengths57.917, 57.917, 206.168
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution51.000

*

- 2.100

*

R-factor0.15963
Rwork0.158
R-free0.19600

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ihi
RMSD bond length0.009
RMSD bond angle1.200

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareCNS
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.000

*

High resolution limit [Å]2.100

*

2.100

*

Rmerge0.087

*

0.220

*

Total number of observations243584

*

Number of reflections23069

*

2550

*

<I/σ(I)>1.7
Completeness [%]94.7

*

74.6

*

Redundancy10.6

*

1.9

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

291PEG, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6 (mg/ml)
21droppotassium phosphate10 (mM)pH7.0
31dropdithiothreitol1 (mM)
41dropEDTA1 (mM)
51dropNADP+2 (mM)
61reservoirPEG400025 (%(w/v))
71reservoirsodium citrate100 (mM)pH6.0
81reservoirMPD2.5 (%(v/v))
91reservoirammonium acetate400 (mM)

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PDB entries from 2024-09-04

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