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1RE0

Structure of ARF1-GDP bound to Sec7 domain complexed with Brefeldin A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths64.725, 72.294, 119.632
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000

*

- 2.400
R-factor0.209
Rwork0.209
R-free0.23800

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012

*

RMSD bond angle1.800

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.490
High resolution limit [Å]2.4002.400
Rmerge0.0610.249

*

Total number of observations136824

*

Number of reflections225312221

*

Completeness [%]99.999.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.54

*

PEG 400, sodium citrate, Tris-HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium citrate50 (mM)
21reservoirPEG40019 (%(w/v))
31reservoirTris-HCl100 (mM)pH8.5
41dropHEPES20 (mM)
51drop150 (mM)
61dropdithiothreitol4 (mM)

224572

PDB entries from 2024-09-04

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