Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1R8S

ARF1[DELTA1-17]-GDP IN COMPLEX WITH A SEC7 DOMAIN CARRYING THE MUTATION OF THE CATALYTIC GLUTAMATE TO LYSINE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-3
Synchrotron siteESRF
BeamlineID14-3
Temperature [K]100
Wavelength(s)0.931
Spacegroup nameP 32 2 1
Unit cell lengths104.018, 104.018, 69.277
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000

*

- 1.460
R-factor0.15941
Rwork0.159
R-free0.17300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1R8R and crystal structure of the Arf1[D1-17]/Gea2-Sec7 complex (Goldberg J. (1998) Cell 95(2):237-48)
RMSD bond length0.015
RMSD bond angle1.421
Data scaling softwareXDS
Phasing softwareCCP4 ((MOLREP))
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.470
High resolution limit [Å]1.4601.460
Number of reflections75051
<I/σ(I)>26.65.9
Completeness [%]97
Redundancy1612.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP616

*

1.88M Ammonium Sulfate, 100mM MES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate1.88 (M)
21reservoirMES100 (%)pH6.

229183

PDB entries from 2024-12-18

PDB statisticsPDBj update infoContact PDBjnumon