1P0S
Crystal Structure of Blood Coagulation Factor Xa in Complex with Ecotin M84R
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-03 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.1 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 66.839, 108.050, 186.305 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.800 |
R-factor | 0.207 |
Rwork | 0.207 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 25.700 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.093 | 0.549 |
Number of reflections | 16994 * | |
<I/σ(I)> | 11.2 | 2.7 |
Completeness [%] | 92.9 | 85.1 |
Redundancy | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.1 | 298 | PEG 3350, sodium potassium tartrate, sodium chloride, magnesium chloride, glycerol, MPD , pH 7.1, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5.4 (mg/ml) | |
2 | 1 | reservoir | PEG3350 | 20 (%) | |
3 | 1 | reservoir | sodium potassium tartrate | 0.2 (M) | pH7.1 |