1NDO
NAPHTHALENE 1,2-DIOXYGENASE
Experimental procedure
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-11 |
Detector | MARRESEARCH |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 105.000, 174.000, 282.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.200 * |
R-factor | 0.194 * |
Rwork | 0.190 |
R-free | 0.23800 * |
Structure solution method | MIR AND MAD |
RMSD bond length | 0.020 |
RMSD bond angle | 0.040 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.290 |
High resolution limit [Å] | 2.200 * | 2.250 |
Rmerge | 0.091 | 0.386 * |
Number of reflections | 117067 | 5920 * |
<I/σ(I)> | 14.66 | 3.6 |
Completeness [%] | 96.0 * | 97 * |
Redundancy | 6.2 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6 | pH 6.0 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 40 (mg/ml) | |
2 | 1 | reservoir | ammonium sulfate | 2.31 (M) | |
3 | 1 | reservoir | MES | 0.1 (M) | |
4 | 1 | reservoir | PEG | 2 (%) |