Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NB5

Crystal structure of stefin A in complex with cathepsin H

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]90
Detector technologyCCD
Collection date2001-12-10
DetectorADSC QUANTUM 4
Wavelength(s)0.933
Spacegroup nameP 21 21 21
Unit cell lengths91.629, 97.575, 162.188
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.400
Rwork0.235
R-free0.27400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1stf 8pch
RMSD bond length0.013
RMSD bond angle1.870
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareMAIN
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]99.000

*

2.530
High resolution limit [Å]2.4002.400
Rmerge0.104

*

0.342

*

Total number of observations1185453

*

Number of reflections56687
<I/σ(I)>4.3
Completeness [%]98.496.8
Redundancy20.95
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

4.222

*

PEG 4000, ammonium sulphate, sodium acetate, cadmium chloride, pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400018 (%(w/v))
21reservoirammonium sulfate0.18 (M)
31reservoirsodium acetate0.1 (M)pH4.2
41dropprotein7 (mg/ml)
51drop40 (mM)

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon