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1M4U

Crystal structure of Bone Morphogenetic Protein-7 (BMP-7) in complex with the secreted antagonist Noggin

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2001-04-15
DetectorADSC QUANTUM 4
Wavelength(s)1.04888, 0.91987, 0.91957, 0.88557
Spacegroup nameP 41 21 2
Unit cell lengths99.834, 99.834, 150.327
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution60.000

*

- 2.420
R-factor0.24243
Rwork0.241
R-free0.27300

*

Structure solution methodMAD
RMSD bond length0.035
RMSD bond angle3.000

*

Data reduction softwareTRUNCATE
Data scaling softwareCCP4 ((TRUNCATE))
Phasing softwareMLPHARE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.0002.483
High resolution limit [Å]2.4202.420
Rmerge0.054

*

0.331

*

Total number of observations92080

*

Number of reflections28463
Completeness [%]96.899.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52980.6 M disodium, 1.0 M monopotassium phosphate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21reservoirdisodium0.6 (M)
31reservoirmonopotassium phosphate1.0 (M)pH6.5

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PDB entries from 2025-06-18

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