Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1KDW

X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with the inhibitor 4-carboxyphenylboronic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]103
Detector technologyIMAGE PLATE
Collection date1998-10-01
DetectorRIGAKU RAXIS IIC
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths118.550, 77.380, 97.330
Unit cell angles90.00, 115.30, 90.00
Refinement procedure
Resolution20.000 - 2.280
Rwork0.186
R-free0.23400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1c3b
RMSD bond length0.010
RMSD bond angle1.500
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.370
High resolution limit [Å]2.2802.280
Rmerge0.0750.190
Total number of observations90630

*

Number of reflections33450
<I/σ(I)>16.23.5
Completeness [%]91.062.6
Redundancy2.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.723

*

used microseeding

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirpotassium phosphate1.7 (M)pH8.7
21dropprotein0.485 (mM)
31droppotassium phosphate1.7 (M)pH8.7

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon