Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JK8

Crystal structure of a human insulin peptide-HLA-DQ8 complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
Collection date2000-01-01
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths66.034, 42.862, 87.467
Unit cell angles90.00, 102.48, 90.00
Refinement procedure
Resolution29.160 - 2.400
R-factor0.224
Rwork0.224
R-free0.25800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014

*

RMSD bond angle1.650

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.4002.400

*

Rmerge0.1030.362

*

Number of reflections18183
Completeness [%]95.0
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP3.5291PEG 8000, magnesium acetate, pH 3.5, VAPOR DIFFUSION, HANGING DROP, temperature 18K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein2-5 (mg/ml)
21reservoirPEG800018-25 (%)
31reservoirglycine100 (mM)
41reservoirmagnesium acetate100 (mM)

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon